Chapter 7b : Glucose catabolism – respiratory chain

In 1935, Engelhardt analysed the rate of ATP in red blood cells (globules rouges) as a function of the rate of oxygen. The experiments showed that the ATP increases with the quantity of O2. Contrarily to the yeast, the blood cells had to be in one piece to observe the phenomenon. Even more, some enzymes […]

Chapter 2 : Organic chemistry – Exercises

This section is a full part of the course and contains some reactions that were not addressed in the main course. It is challenging to understand by yourselves some mechanisms with the hints that are in the exercises. If you don’t succeed, don’t worry. The solutions and the description of the reactions are directly following […]

Chapter 2 : the chemical composition of DNA

DNA is a polymer ( a large molecule that contains repeating units) composed of 2’ deoxyribose (a five-carbon sugar), phosphoric acid, and the four nitrogen containing bases denoted A, T, G and C. The chemical structures of the bases are shown below. Note that two of the bases have a double-ring structure, these are called […]

Chapter 12 : Spectroscopic methods

Spectroscopic methods are destined to determine the composition of samples containing one or several species on the basis of their energy levels. We have seen that the electrons of atoms don’t have access to any value of energy. They are limited to a few values of energy, the energy orbital’s/levels 1s, 2s, 2p, etc, on […]

Chapter 11 : Reactions of substitution on aromatic cycles

Aromatic cycles, such as the benzene, are very stable because of their energy of resonance. As a result, it is very difficult to “open” the cycle by an usual reaction of addition. Instead of addition reactions, we observe reactions of substitution. The mechanism involves two steps. the first step is the electrophile attack of one […]

Chapter 10 : Reactions of carboxylic acids and their derivatives

All the atoms of carboxylic acids groups have a specific character. The group is thus ambident: it possesses two or more alternative and strongly interacting distinguishable reactive centres. It has acidic and basic properties. A carboxylic acid is more acid than the corresponding alcohol because the conjugated base, the carboxylate, is stabilised by resonance (pKa≈5 […]

Chapter 9 : carbanions in α of carbonyl

In the previous section, we discussed the possible reaction on the carbonyl group of organic molecules. The carbon is an electrophile and the oxygen is a nucleophile. Yet, the presence of a carbonyl can imply other processes. The hydrogen’s that are on a carbon neighbour of a carbonyl group, i.e. the carbon in α of […]

Chapter 8 : Reactions of elimination

A reaction of elimination is a reaction during which one molecule loses two fragments A and B as a neutral substrate AB. The two fragments A and B that are removed can be removed from the same carbon, in which case we talk about a 1,1 elimination, from two adjacent carbons (1,2 elimination or beta […]

Chapter 7 : Electrophile additions on alkenes and alkynes

The interest of electrophile additions on C=C liaisons is to transform two sp2 carbons into two sp3 carbons and to add a chain or a group on the existing molecule.  As two carbons are involved in the reaction, the addition of the new group can give several products, with more or less (stereo)selectivity. Moreover, the […]

Chapter 6: Polymers

Nowadays, we find polymers everywhere. They can be solid or flexible, resist to low or high temperatures but are generally lighter than the materials they replace. For instance, wood or metallic chairs are advantageously replaced by plastic chairs. Plastic bags are in every shop (yet also in oceans or forests) and can support heavy charges […]